Anthony Gitter
agitter
Associate professor in Biostatistics and Medical Informatics at the University of Wisconsin-Madison; Investigator at the Morgridge Institute for Research
Languages
Top Repositories
An overview of algorithms for estimating pseudotime in single-cell RNA-seq data
Sequences from Adaptyv Bio’s EGFR Protein Design Competition
A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.
OpenADMET + ExpansionRx Blind Challenge
Signaling and Dynamic Regulatory Events Miner
"A renewed call for open artificial intelligence in biomedicine" author ordering
Repositories
97An overview of algorithms for estimating pseudotime in single-cell RNA-seq data
OpenADMET + ExpansionRx Blind Challenge
Molecular Processing Made Easy.
Sequences from Adaptyv Bio’s EGFR Protein Design Competition
A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.
Introduction to Docker and reproducible computational environments.
Data and software for building the ACL Anthology.
"A renewed call for open artificial intelligence in biomedicine" author ordering
pgmpy env to test repo2docker
PyTorchGeometric env to test repo2docker
The ADMET Challenge of the ASAP Discovery competition
AlphaFold 3 inference pipeline.
No description provided.
Official repository for the Boltz-1 biomolecular interaction model
User friendly and accurate binder design pipeline
Metrics for our protein design competitions.
No description provided.
Scientific Large Language Models: A Survey on Biological & Chemical Domains
No description provided.
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
List of papers about Proteins Design using Deep Learning
Light-weight Machine Learning Framework for Drug Discovery
comparing drug classification methods
Deep learning for molecules and materials book
No description provided.
The Rosetta Bio-macromolecule modeling package.
No description provided.
Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey"
Listing of papers about machine learning for proteins.
Signaling and Dynamic Regulatory Events Miner