Taylor Salo
tsalo
I am a postdoctoral fellow at UPenn in the @PennLINC lab. I am interested in performing reproducible, transparent research with fMRI.
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Top Repositories
Python functions to convert E-Prime files to csvs. Not currently being developed, but issues and PRs welcome!
Just small functions for preprocessing, analysis, etc. of fMRI data.
TE-dependent analysis of multi-echo fMRI
Machine learning for NeuroImaging in Python
Coordinate- and Image-based meta-analysis in Python
Python tools for querying and manipulating BIDS datasets.
Repositories
159TE-dependent analysis of multi-echo fMRI
Python tools for querying and manipulating BIDS datasets.
Validator for the Brain Imaging Data Structure
Validator for the Brain Imaging Data Structure
Brain Imaging Data Structure (BIDS) Specification
Common workflows for MRI (anatomical, functional, diffusion, etc)
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
Python functions to convert E-Prime files to csvs. Not currently being developed, but issues and PRs welcome!
rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
Tools to simulate multi-echo fMRI time series
Characterizing the distribution of neural and non-neural components in multi-echo EPI data across echo times based on Tensor-ICA
Machine learning for NeuroImaging in Python
Processing tools for magnetic resonance images of infant brains
A python client to query TemplateFlow via pyBIDS
Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
The NiPreps' Reporting and Visualization system - report templates and "reportlets"
little helper to ease DICOM conversion to ready-to-share folder with heuristics
Website for the NBC lab
No description provided.
Workflows and interfaces for neuroimaging packages
Just small functions for preprocessing, analysis, etc. of fMRI data.
Automated feature extraction in Python
Coordinate- and Image-based meta-analysis in Python
Post-processing of fMRIPrep , NiBabies, HCP, and DCAN outputs
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
Complex Principal Component Analysis of fMRI in Python
MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density
Forced alignment for audio transcripts
:triangular_ruler: Website for Reproducible Brain Charts Project