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Scott Cain

scottcain

Organizations

Languages

JavaScript24%TypeScript24%Perl19%Python14%Jupyter Notebook10%HTML5%Dockerfile5%

Repositories

59
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scottcain/tools-iucFork

Tool Shed repositories maintained by the Intergalactic Utilities Commission

HTML00Updated 1 month ago
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scottcain/training-materialFork

A collection of Galaxy-related training material

00Updated 1 month ago
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scottcain/brc-analyticsFork

No description provided.

00Updated 2 months ago
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scottcain/whitePaper2Fork

No description provided.

00Updated 2 months ago
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scottcain/veupathdb_gff_to_bed_gtf

No description provided.

Perl00Updated 4 months ago
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scottcain/jxtxFork

No description provided.

JavaScript00Updated 4 months ago
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scottcain/PMID_to_map

Take a list of PubMed IDs and get the geocoordinates of the last author's institution for mapping.

Python00Updated 4 months ago
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scottcain/veupath_extraction

A (hopefully) simple script to extract data from VEuPathDB's JBrowse server

Perl00Updated 7 months ago
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scottcain/expanding-universeFork

Its purpose is to inform you of bioinformatics repositories gaining popularity on GitHub by listing those repositories (with links and stats) in the repository’s README.

Python00Updated 8 months ago
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scottcain/galaxyFork

Data intensive science for everyone.

00Updated 9 months ago
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scottcain/VGP_SM_post_generator

A LLM-powered tool for generating social media posts announcing genomes assembled by VGP.

Perl00Updated 9 months ago
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scottcain/jbrowse-site-specific-help

A JBrowse 2 plugin to make a site specific help widget

TypeScript02Updated 11 months ago
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scottcain/seqpanel

stand alone seq panel that highlights subfeatures

TypeScript02Updated 1 year ago
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scottcain/vgp_hub_page_dataFork

No description provided.

Jupyter Notebook00Updated 1 year ago
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scottcain/scottcain

My config repo

Perl00Updated 1 year ago
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scottcain/alliance_test_seqpanel

simple test app for GenericGeneSeqPanel with Alliance data

TypeScript00Updated 1 year ago
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scottcain/jbrowse-proxy

Proxy to avoid CORS issues

00Updated 2 years ago
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scottcain/get-fasta-sequence

web app for getting fasta sequences from a bgzipped fasta file

TypeScript00Updated 2 years ago
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scottcain/jbrowse-plugin-listFork

List of plugins for the JBrowse 2 plugin store.

00Updated 2 years ago
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scottcain/crav4

No description provided.

JavaScript00Updated 2 years ago
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scottcain/website-nclist

Creating a page to return overlapping genes for a location

JavaScript00Updated 2 years ago
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scottcain/jbrowse-componentsFork

Monorepo with JBrowse 2 web, JBrowse 2 desktop, the JB core package, and core plugins. To customize behaviors, write an in-house plugin.

TypeScript00Updated 3 years ago
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scottcain/amplify-test

testing with aws amplify

JavaScript00Updated 3 years ago
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scottcain/jcviFork

Python library to facilitate genome assembly, annotation, and comparative genomics

Python00Updated 3 years ago
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scottcain/jbrowse-jupyter-examples

Example jupyter notebooks that use JBrowse

Jupyter Notebook00Updated 3 years ago
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scottcain/azure-mudFork

No description provided.

00Updated 4 years ago
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scottcain/flybase-jbrowse

Demo JBrowse docker config for FlyBase

JavaScript00Updated 4 years ago
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scottcain/zfin-jbrowse

JBrowse configs to replication GBrowse functionality

Dockerfile00Updated 4 years ago
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scottcain/recreation-gov-campsite-checkerFork

Scrapes the recreation.gov website to check for campsite availabilities 🏕🏕

00Updated 5 years ago
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scottcain/rcloneFork

"rsync for cloud storage" - Google Drive, Amazon Drive, S3, Dropbox, Backblaze B2, One Drive, Swift, Hubic, Cloudfiles, Google Cloud Storage, Yandex Files

00Updated 5 years ago

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Scott Cain (scottcain) | GitHunt