Sara Monzón
saramonzon
Bioinformatics rules! @BU-ISCIII
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is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
Assembly and intrahost/low-frequency variant calling for viral samples
Repository to host tool-specific module files for the Nextflow DSL2 community!
set of helper tools for the assembly of the different elements in the RELECOV platform (Spanish Network for genomic surveillance of SARS-Cov-2) as data download, processing, validation and upload to public databases, as well as analysis runs and database storage.
A minimal/example hugo site for node pathogens portal. Checkout the demo site following the URL below
Conda recipes for the bioconda channel.
Repositories
35Assembly and intrahost/low-frequency variant calling for viral samples
Repository to host tool-specific module files for the Nextflow DSL2 community!
set of helper tools for the assembly of the different elements in the RELECOV platform (Spanish Network for genomic surveillance of SARS-Cov-2) as data download, processing, validation and upload to public databases, as well as analysis runs and database storage.
A minimal/example hugo site for node pathogens portal. Checkout the demo site following the URL below
Conda recipes for the bioconda channel.
No description provided.
New pikavirus in dsl2
Our Wiki and main public documentation repository.
set of helper tools for bu-isciii management of its core services portfolio.
is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
No description provided.
cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.
A proof of concept RNA-Seq pipeline with Nextflow
No description provided.
Sitio web del Simposio de Estudiantes Hispanohablantes de Bioinformática y Biología Computacional | Website of the Spanish-Speaking Students Symposium in Bioinformatics and Computational Biology
Testing building mulled containers for multi-requirement tools.
:blue_book: 🌍 An interesting collection of GIS related tutorials
Beacon v2.x
No description provided.
This repository contains a internal web page for sequencing runs management for NextSeq and MiSeq Illumina machines.
iSkyLIMS home website for information and links purposes
No description provided.
Custom and useful features for django
Nextflow ChIP-seq data analysis pipeline, National Genomics Infrastructure, Science for Life Laboratory in Stockholm
Analysis pipeline for small-RNA sequencing data.
No description provided.
:christmas_tree:Visualization and annotation of phylogenetic trees
16S rRNA amplicon sequencing analysis workflow using QIIME2
:scissors: :zap: Rapid haploid variant calling and core genome alignment
Benchmark datasets for WGS analysis