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Ranit Karmakar

rkarmaka

Harvard Medical School
Boston, MA

Languages

Python41%Jupyter Notebook36%HTML9%CSS9%JavaScript5%

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Repositories

42
RK
rkarmaka/altair

No description provided.

Python00Updated 1 month ago
RK
rkarmaka/NoRI-VisualizerFork

No description provided.

10Updated 1 month ago
RK
rkarmaka/segmentation-evaluation

No description provided.

Python00Updated 2 months ago
RK
rkarmaka/NoRIFork

Pipeline for kidney tissue segmentation & quantification using Normalized Raman Imaging (NoRI) with SAM & Ilastik.

Python10Updated 5 months ago
ilastikkidneysegment-anythingsegmentation
RK
rkarmaka/courseFork

The Hugging Face course on Transformers

00Updated 6 months ago
RK
rkarmaka/rkarmaka.github.io

No description provided.

HTML00Updated 6 months ago
RK
rkarmaka/rkarmaka

No description provided.

00Updated 6 months ago
RK
rkarmaka/home

My Personal Website

HTML00Updated 6 months ago
RK
rkarmaka/BioIQ

Quality control for bioimage analysis

Jupyter Notebook01Updated 6 months ago
RK
rkarmaka/SAM-using-Python-for-Microscopy-Data

No description provided.

Jupyter Notebook43Updated 1 year ago
RK
rkarmaka/SoftPQ

SoftPQ is a tunable, robust instance segmentation metric that replaces binary matching with soft matching to enable more robust and interpretable evaluation aligned with qualitative segmentation quality.

JavaScript21Updated 7 months ago
evaluation-metricsmeasurementsegmentation
RK
rkarmaka/bobiacFork

Teaching materials for Boston Bioimage Analysis Course (BoBiAC).

Jupyter Notebook00Updated 8 months ago
RK
rkarmaka/GBI-Python-2025

Course material for Global BioImaging Image Data 2025 Course in Pune India

Jupyter Notebook01Updated 9 months ago
RK
rkarmaka/code-orator

Code-Orator is a local-first tool that helps developers quickly understand unfamiliar codebases.

Python00Updated 11 months ago
RK
rkarmaka/Coursera

No description provided.

Jupyter Notebook00Updated 11 months ago
RK
rkarmaka/muse-mind

A tiny local LLM-powered text-generator that surprises you with quirky stories and encourages curious exploration.

Python10Updated 11 months ago
RK
rkarmaka/LUTiPy

LUTiPy is a Python package for creating aesthetically pleasing composite images from fluorescent microscopy data using complementary LUTs.

Jupyter Notebook01Updated 1 year ago
RK
rkarmaka/sample-datasets

This repository contains sample images and datasets used for testing.

00Updated 1 year ago
RK
rkarmaka/PyLastik

No description provided.

00Updated 1 year ago
RK
rkarmaka/Chest-X-Ray-Medical-Diagnosis-with-Deep-Learning

No description provided.

42Updated 5 years ago
RK
rkarmaka/Mobile-CellNet

No description provided.

Python00Updated 1 year ago
RK
rkarmaka/DIOS

No description provided.

Jupyter Notebook00Updated 1 year ago
RK
rkarmaka/IAC-Website-Dev

No description provided.

CSS00Updated 1 year ago
RK
rkarmaka/bostonbias_dev.github.io

BostonBIAS development site

CSS00Updated 1 year ago
RK
rkarmaka/napari-sam-promptFork

A napari plugin that implements SAM prompts predictor

Python00Updated 1 year ago
RK
rkarmaka/Mobile-PolypNet

Code and models for Mobile-PolypNet

Python41Updated 4 years ago
RK
rkarmaka/TransplantTissueClassification

No description provided.

00Updated 3 years ago
RK
rkarmaka/ML-Model-Interpretation

No description provided.

10Updated 5 years ago
RK
rkarmaka/Mobile-RetinaNet

No description provided.

Python00Updated 4 years ago
RK
rkarmaka/notebooks-sharingFork

Writing and Sharing Computational Analyses in Jupyter Notebooks

Jupyter Notebook01Updated 4 years ago

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