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Pádraic Corcoran

padraicc

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Python53%Shell27%Nextflow13%C++7%

Top Repositories

Repositories

21
PA
padraicc/nalloFork

An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.

Nextflow00Updated 3 months ago
PA
padraicc/test-datasetsFork

Test data to be used for automated testing with the nf-core pipelines

00Updated 5 months ago
PA
padraicc/modulesFork

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow00Updated 5 months ago
PA
padraicc/nallorefsFork

No description provided.

00Updated 8 months ago
PA
padraicc/uspopgen

Population genomics workshop at the University of Sheffield

Shell52Updated 1 year ago
PA
padraicc/mkdocs_snakemake_rule_pluginFork

No description provided.

00Updated 1 year ago
PA
padraicc/twist_exome_38Fork

No description provided.

00Updated 4 years ago
PA
padraicc/sfs_utilsFork

A collection of scripts to extract the site frequency spectrum from various file formats.

Python00Updated 8 years ago
PA
padraicc/Corcoran_et_al_2017

GATK SNP calling using whole genome sequences of Great tits and Zebra finch

Shell01Updated 8 years ago
PA
padraicc/mat_locus_phylogenetics

Phylogenetic analysis of the mat genes of Neurospora tetrasperma

Shell00Updated 8 years ago
PA
padraicc/neurospora_orthologs

No description provided.

Shell00Updated 8 years ago
PA
padraicc/python_qsub_wrapperFork

No description provided.

Python00Updated 9 years ago
PA
padraicc/Parus_reseq_30birds

No description provided.

00Updated 9 years ago
PA
padraicc/pNpS

No description provided.

Python01Updated 9 years ago
PA
padraicc/popgen_stats

No description provided.

Python01Updated 9 years ago
PA
padraicc/genomics-workshop2016Fork

Genome-wide association practical for genomics workship in Sheffield

00Updated 9 years ago
PA
padraicc/cyvcfFork

A fast Python library for VCF files leveraging Cython for speed.

Python00Updated 10 years ago
PA
padraicc/CNVnatorFork

a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads

C++00Updated 10 years ago
PA
padraicc/EvolibFork

Some useful python classes for analysing sequence data

Python00Updated 10 years ago
PA
padraicc/dfe_scripts

No description provided.

Python00Updated 10 years ago
PA
padraicc/bgs

No description provided.

Python00Updated 11 years ago

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