Alexey Strokach
ostrokach
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Python
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Top Repositories
Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
Interactive tutorial notebooks for CSC343 - Introduction to Databases.
Gene Set Enrichment Analysis in Python
UniParc dataset describing ~300 million protein sequences converted into relational tables accessible through Google BigQuery (and as Parquet files).
Automatically exported from code.google.com/p/cinfony
Repositories
83Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
Interactive tutorial notebooks for CSC343 - Introduction to Databases.
Gene Set Enrichment Analysis in Python
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
No description provided.
UniParc dataset describing ~300 million protein sequences converted into relational tables accessible through Google BigQuery (and as Parquet files).
scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.
Automatically exported from code.google.com/p/cinfony
Scripts for making a "protein folding energy" dataset.
No description provided.
Predicting synergistic drug combinations in the AstraZeneca-Sanger drug combination prediction DREAM challenge.
Predicting synergistic drug combinations.
No description provided.
Classifier trained to predict whether a protein sequence matches an adjacency network and a GAN trained to fool the classifier.
A Java serialization/deserialization library to convert Java Objects into JSON and back
No description provided.
No description provided.
Open source code for AlphaFold.
📝 Minimalistic Vue-powered static site generator
No description provided.
No description provided.
Conda recipes for the bioconda channel.
Ensemble Learning Approach for Stability Prediction of Interface and Core mutations.
Repository to host the Docker images files used in conda-forge
Modern command line HTTP client — user-friendly curl alternative with intuitive UI, JSON support, syntax highlighting, wget-like downloads, extensions, etc. Follow https://twitter.com/CLIHTTP for tips and updates.
Code for the preprint: Exploring amino acid functions and positional subtypes in a deep mutational landscape
Apache Beam
No description provided.
Generation of diagram and flowchart from text in a similar manner as markdown
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