Ilya Shlyakhter

No description provided.

No description provided.

Tools for working with git-annex repositories

Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)

This is the development home of the Snakemake wrapper repository, see

10x Genomics Reads Simulator

a header-only, constexpr alternative to gperf for C++14 users

A conda-smithy repository for mbedtls.

A conda-smithy repository for sdsl-lite.

git-annex external special remote for local dirs under a given path

PBSIM3: a simulator for all types of PacBio and ONT long reads

Deep learning framework for SV calling and genotyping

NAnostring quality Control dasHbOard

scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics

A proof of concept of RNAseq pipeline

A conda-smithy repository for r-base.

A conda-smithy repository for gnutls.

A conda-smithy repository for lighttpd.

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.

A conda-smithy repository for w3m.

Conda recipes for the bioconda channel.

zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs

Parallel version of bagel https://sourceforge.net/projects/bagel-for-knockout-screens/

Scripts to reproduce the results of scAR manuscript 'Probabilistic modeling of ambient noise in single-cell omics data'

A conda-smithy repository for git-annex.

A conda-smithy repository for moreutils.

A conda-smithy repository for gnupg.

A conda-smithy repository for editdistance.

A conda-smithy repository for cyrus-sasl.