Lars B. Rollik

Python API to interact with PulsePal

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Template repository for best-practice Python packages

Arduino-based cheap precision weighing scale for readout via serial communication.

Patterns for ORM in Python via DataJoint

Central control for video acquisition with (many) Raspberry Pi cameras

scripts for running and post-hoc analysis of the 8 poke sequence behavioural task

Docker container for MySQL 8.4 LTS + DataJoint

Docker image for MySQL configured to work with DataJoint

Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.

Modules for processing extracellular electrophysiology data from Neuropixels probes

Headless Ubuntu/Xfce containers with VNC/noVNC (G1v2)

Dash entrypoints: CLI & wrapper for multi-page apps, layout callbacks, and more.

Meta-API for Sensapex Manipulators from uMx family.

GNU Emacs notebook mode

Litterate configuration for GNU Emacs

org-mode modules for citations, cross-references, bibliographies in org-mode and useful bibtex tools to go with it.

Rifle through your Org-mode buffers and acquire your target

A dashboard for mu4e (mu for emacs)

GNU Emacs / N Λ N O - Emacs made simple

Get Things Done with Emacs

Simple ROI-based tracking paradigms

Re-usable GitHub actions

An Emacs minor mode for literate & annotated bibliography

Automated 3D cell detection and registration of whole-brain images

Code for Sparse Variational Gaussian Process Factor Analysis (Duncker and Sahani, 2018)

Python library for the Fan SHIM for Raspberry Pi

An example of a fully custom Emacs configuration developed live on YouTube!

🐜🐀🐒🚶 A toolkit for robust markerless 3D pose estimation

Stytra stimuli and analysis notebooks for Xiao et al, 2022