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amoebae
Workflow for identifying and classifying homologous gene/protein sequences
21Python
jackhmmerer
A snakemake workflow for iterative sequence profile searching using jackhmmer from the HMMer3 package.
1Python
bioconda-recipes
Conda recipes for the bioconda channel.
0
combine_branch_supports
0Python
wol_peptide_subsampler
0Python
sort_seqs_by_clade
Script for sorting FASTA sequences by clade in a given tree topology.
0Python
Repositories
7LA
laelbarlow/amoebae
Workflow for identifying and classifying homologous gene/protein sequences
Python212Updated 5 months ago
bioinformaticsbiopythonblastcomparative-genomicscoulson-plotgene-familiesgenome-annotationhmmer3homologymolecular-evolutionorthologyprotein-familiespython3similarity-searchsnakemake-workflowtranscriptome-annotation
LA
laelbarlow/jackhmmerer
A snakemake workflow for iterative sequence profile searching using jackhmmer from the HMMer3 package.
Python10Updated 4 years ago
evalue-thresholdshmmer3homology-searchjackhmmerprotein-sequencessimilarity-searchsnakemake-workflow
LA
laelbarlow/bioconda-recipesFork
Conda recipes for the bioconda channel.
00Updated 3 years ago
LA
laelbarlow/combine_branch_supports
No description provided.
Python00Updated 2 years ago
LA
laelbarlow/wol_peptide_subsampler
No description provided.
Python00Updated 4 years ago
comparative-genomicsprokaryotic-genomes
LA
laelbarlow/sort_seqs_by_clade
Script for sorting FASTA sequences by clade in a given tree topology.
Python00Updated 5 years ago
biopython-libraryete3phylogenetic-tree
LA
laelbarlow/sgeFork
Snakemake profile for the (Sun) Grid Engine queueing system
00Updated 5 years ago