Jasen Finch

REST API for Mass Spectrometry Data Transfer

A task management and productivity CLI tool

Workflow Project Templates for Metabolomics Analyses

R project templates for reproducible research and analyses

:rocket: R package: BiocParallel.FutureParam - Use Futures with BiocParallel

Methods for pre-treatment, modelling/data mining, and correlation analyses of metabolomics data

Data pre-treatment methods for metabolomics analyses

Targets for high resolution metabolomics workflows

Chemoinformatics tools for annotating untargeted ESI-MS metabolomics data

Spectral binning as an approach to post-acquisition processing of high resolution FIE-HRMS metabolome fingerprinting data

Compositional analyses for metabolomics data

Miscellaneous helper and linker functions for metabolomics analyses

Automated report generation for high resolution metabolomics analyses

Easily install, load and update R packages for high-resolution metabolomics analyses

Docker containers for high resolution metabolomics analyses in R

A collection of utility functions for use with targets pipelines

An alert system to daily monitoring of TreeTalkers devices

ttalkR: a unified pre-processing of TreeTalker data

A simple task scheduling/queuing tool in R

Data driven, matrix-wide molecular formula assignment for high resolution ESI-MS

Toolkit for Selective Reaction Monitoring (SRM) Mass Spectrometry (MS) Data

renv: Project environments for R.

Functional and structural enrichment for metabolomic analyses

Consensus structural classifications for putative molecular formula assignments

missForest is a nonparametric, mixed-type imputation method for basically any type of data for the statistical software R.

Programmatic R Markdown code chunk generation

Miscellaneous functions for the analysis of FIE-HRMS data

eRah development version. For downloads, please use CRAN

:package: for using large(r) data files on GitHub

Miscellaneous R functions