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ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser
parallel-fastq-dump implementation in bash script
Accumulating container resource usage with workflow metadata
A catalogue of docker images for NGS data analysis tools
A ruby parser for FastQC data.
AMED (Japan Agency for Medical Research and Development) research project database with REST API, MCP server, and analytics. ~3,800 projects from 2015-2025.
Repositories
175Deployment and customization layer for Biomni — biomedical AI agent platform
Strategy for AI-assisted coding in a secure genomic data environment using local LLMs
No description provided.
ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser
NOSS — No One Should Suffer (in a Lab): A context-aware protocol assistance system for wet-lab experiments
Minimal example of a BioHackrXiv publication that can be generated with the preview server
webapp source for preview.biohackrxiv.org
No description provided.
Interactive 3D globe visualization of rare disease prevalence data from Orphanet/Orphadata
configuration files for OS X
AMED (Japan Agency for Medical Research and Development) research project database with REST API, MCP server, and analytics. ~3,800 projects from 2015-2025.
Webserver for wPGSA
GitHub Pages repository hosting www.open-bio.org content
Command line tool for detecting life science data types.
No description provided.
Accumulating container resource usage with workflow metadata
No description provided.
No description provided.
Created by Claude Sonnet 4
Analysis of RNA-Seq for DE Genes in Candida albicans.
No description provided.
A catalogue of docker images for NGS data analysis tools
Slides of presentation, mostly in markdown for Marp
No description provided.
parallel-fastq-dump implementation in bash script
A ruby parser for FastQC data.
A simple download tool to download .sra file from Sequence Read Archive
No description provided.
Slides for SWC Workshop 2024-05-30-chiba
A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification.