Hasselmonians

Code for Jiang, Hijazi et al., Cell Reports, 2025

Matlab code for egocentric boundary cell identification in freely behaving animals

MATLAB Package for Neural Data

Classification using UMAP and kmeans

Code for LaChance and Hasselmo, 2024

Code for Robinson et al., 2024

Running speed modulation of local field potential frequency/amplitude/etc

An improved method for examining neural single unit rhythmicity using maxmimun likelihood estimation for a parametric distribution of lags.

Probability densities for exponentially-modified gaussian distributions

No description provided.

PoInt Process Neuron

A simple jupyter notebook to test the undergrads' programming skills.

Behavioral + electrophysiology analyses in python

Estimate optimal bandwidth parameter for spike train smoothing using MLE leave-one-out cross-validation.

No description provided.

A general tool for passing data to the cluster

WIP ui for the 3D tracking pipeline

An algorithm that facilitates cell counting via NIH ImageJ software

Produces a model of the relationship between an extrinisic observable signal and an intrinsic covarying spike train

No description provided.

find conductance-based models that satisfy exponential decay in firing rate

determining whether firing rate is modulated by light/dark conditions

Estimate the bandwidth parameter for smoothing spike-train data.

Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and theta phase information. Used in Hardcastle et al., 2017.

Exploring the parameter spaces of neural models

No description provided.

Implementation of the pass index technique for looking at open-field phase precession.

fundamental algorithm of neocortical function -- no big deal

Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

No description provided.