Pipelines in progress for GWAS analysis

A tutorial for Advanced Scientific Python Programming on organizing, documenting, and distributing code

demonstration repo for ASPP-APAC 2019

Code and data for power analysis in Gagliardi et al. 2019

R scripts for metabarcoding analysis for invertebrate COI amplicon data

R package for making a metabarcoding reference database

Some data from the Drosophila desiccation selection experiment described in Griffin et al. 2016 (DOI: 10.1534/genetics.116.187104)

R string calculation for Git workshop

desiccation selection experiment R scripts

Material for Polar Bear population genomics tutorial

Backup of amplicon resequencing data processing scripts for use with QIIME

Novice R materials for Software Carpentry Workshops

Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests

No description provided.

Bioinformatics pipeline files for processing selected line sequences

A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.

Some R code for plotting phylogenetic trees

Infrastructure code to support DNA pipeline

A tool to compare variants contained within multiple vcf format files, to determine common and unique variants to each file. To write these variants to a new file also in vcf format.

Software Carpentry Bootcamp repository