GitHunt

galantelab

galantelab

Bioinformatics Group

São Paulo - SP - Brazil

Languages

Perl18%Meson18%Shell14%R14%C14%HTML9%SCSS5%Nextflow5%Makefile5%

Top Repositories

Repositories

22
GA
galantelab/fredy

Tool to identify chimeric events from RNA-Seq data

Shell80Updated 20 hours ago
chimericrna-seqrna-seq-analysisrna-seq-pipeline
GA
galantelab/blog

Blog de divulgação científica do laboratório dos Galantes

SCSS00Updated 1 month ago
blogscience
GA
galantelab/precisecaller

A complete, scalable, easy-to-use, open-source platform for genomic variant detection in Oncology and Precision Medicine

Nextflow00Updated 1 month ago
GA
galantelab/sandy

A straightforward and complete next-generation sequencing read simulator

Perl223Updated 3 months ago
genomicsilluminananoporenext-generation-sequencingpacbiosimulationstructural-variationtranscriptomics
GA
galantelab/reboot

Regression and survival tool with a multivariate bootstrap approach

R21Updated 7 months ago
GA
galantelab/jb_2025_SAdv

bulk and single-cell RNA-seq pipelines

HTML00Updated 7 months ago
GA
galantelab/sider-aws

Run sider pipeline on AWS

Makefile00Updated 1 year ago
GA
galantelab/sideRETRO

A pipeline for detecting Somatic Insertion of DE novo RETROcopies

C95Updated 1 year ago
cnvgenotypemobile-elementsnext-generation-sequencingpolimorphismpseudogenesretrocopyweswgs
GA
galantelab/sider-pipeline

A massive pipeline on AWS for retroCNVs discovery

Perl00Updated 1 year ago
GA
galantelab/nomaR

No description provided.

C00Updated 1 year ago
GA
galantelab/siderdb

a database for polymorphic retrocopies in human populations

Perl00Updated 2 years ago
GA
galantelab/sandy-uppercase

No description provided.

HTML00Updated 2 years ago
GA
galantelab/galante-make

Bash wrapper for GNU/Make

Shell00Updated 2 years ago
GA
galantelab/MAGOHMAGOHB

Collection of scripts used in "The paralogues MAGOH and MAGOHB are oncogenic factors in high grade gliomas and safeguard the splicing of cell division and cell cycle genes."

R00Updated 3 years ago
GA
galantelab/graphics-compilation

A compilation of useful graphics for Bioinformatics tasks in R an Perl.

Perl12Updated 4 years ago
GA
galantelab/tipseq_hunter

Dockerfile for TIPseqHunter pipeline

Shell21Updated 4 years ago
GA
galantelab/guardia_etal-GSCs

No description provided.

R00Updated 6 years ago
GA
galantelab/bwa

BWA (libbwa) static build meant for Meson subprojects

Meson00Updated 6 years ago
GA
galantelab/htslib

HTSLib static build meant for Meson subprojects

Meson00Updated 6 years ago
GA
galantelab/zlib

zlib static build meant for Meson subprojects

Meson00Updated 6 years ago
GA
galantelab/sqlite-amalgamation

SQLite static build meant for Meson subprojects

Meson00Updated 6 years ago
GA
galantelab/gsia

A third-world gene set impoverishment analysis

C00Updated 7 years ago

Gists

Recent Activity