Catalina Vallejos

BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/packages/BASiCS/ for the official release version

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Code provided as supplementary material of "Bayesian survival modelling of university outcomes"

Shiny Interactive Web Apps for Single-Cell Data

Accelerated failure times survival regression using Rate Mixtures of Weibull distributions

Clone of the Bioconductor repository for the scater package, see https://bioconductor.org/packages/devel/bioc/html/scater.html for the official development version.

This tutorial was created using an old version of BASiCS and its code is outdated. This repository is no longer maintained. For up-to-date documentation, please refer to the vignette available at https://github.com/catavallejos/BASiCS or to https://github.com/catavallejos/BASiCS/wiki.

Analysis code for Nils and Catalina's regression extension

Code for Celia and Nils' immune aging project.

Evaluating the reproducibility of mortality prediction studies in the MIMIC-III database

This repository includes some of my conference/workshop/seminar slides

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

R code used to produce the results shown in Vallejos and Steel (2017). Incorporating unobserved heterogeneity in Weibull survival models: A Bayesian approach. Econometrics and Statistics

This repository includes supplementary files for some of my publications.

Bioinformatics workshop on Data management, analysis and visualisation

:exclamation: This is a read-only mirror of the CRAN R package repository. truncnorm — Truncated normal distribution

R wrapper for a Java Bayesian GLM variable selection package