bioFAM
Our group develops and applies computational approaches to study molecular variations and their phenotypic consequence. We are part of DKFZ and EMBL.
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Multi-Omics Factor Analysis
Multi-Omics Factor Analysis
Multi-omics factor analysis v2
Work with trained factor models in Python
factor models for omics data
scDoRI (single-cell Deep multi-Omic Regulatory Inference) is a deep learning model to infer enhancer-mediated gene regulatory networks (eGRNs) from single-cell multiome data (RNA + ATAC).
Repositories
16factor models for omics data
Multi-Omics Factor Analysis
scDoRI (single-cell Deep multi-Omic Regulatory Inference) is a deep learning model to infer enhancer-mediated gene regulatory networks (eGRNs) from single-cell multiome data (RNA + ATAC).
Multi-Omics Factor Analysis
Work with trained factor models in Python
Repository containing the code to reproduce the analyses contained in the MEFISTO manuscript
Multi-omics factor analysis v2
Analyses, benchmarks and tutorials related to the Prismo project
MOFA2 Tutorials
A probabilistic factor model for spatial transcriptomics data with subcellular resolution
Implementation of a Modular Multi-Omics Factor Model Framework
No description provided.
Repository containing tutorials for MEFISTO
Data for Multi-Omics Factor Analysis (MOFA)
PEER using MOFA
No description provided.