Greater Paris University Hospitals (AP-HP)
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Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.
EDS-Pseudo is a hybrid model for detecting personally identifying entities in clinical reports
EDS-PDF is a generic, pure-Python framework for text extraction from PDF documents. It provides the machinery to use rule- or machine-learning-based approaches to classify text blocs between body and meta-data.
A web application to find patients, build cohorts and visualize health records
eds-scikit is a Python library providing tools to process and analyse OMOP data
EDS-TeVa provides a set of tools that aims at modeling the adoption over time and across space of the Electronic Health Records.
Repositories
49FHIR Implementation Guide for Data Management
Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.
jupyter-eds-notebooks provides Docker images with preconfigured Jupyter environments for clinical and health data analysis, tailored for AP‑HP Datalabs and the HELIX platform.
No description provided.
EDS-Pseudo is a hybrid model for detecting personally identifying entities in clinical reports
HELIX (Health and Exploration Lab for Innovative eXperiments) is an AP‑HP open‑source platform that bundles data lab and clinical research tools into a secure, easily deployable Kubernetes stack.
This repository hosts GitHub Workflows examples to be used in APHP Projects
PyTorch extension for handling deeply nested sequences of variable length
A web application to find patients, build cohorts and visualize health records
No description provided.
A variety of tutorials introducing some issues related to the analysis of health real world data available for researchers in clinical data warehouses.
:globe_with_meridians:Access WHO Global Health Observatory Data From R
APHP REDCap cloud-native and vendor-agnostic HelmChart
EDS-PDF is a generic, pure-Python framework for text extraction from PDF documents. It provides the machinery to use rule- or machine-learning-based approaches to classify text blocs between body and meta-data.
Various plugins and extensions to customize mkdocs
A set of container images used to run APHP REDCap Helmchart
FHIR FrCore Implementation Guide
Part of the Cohort360 Project @ https://github.com/aphp/Cohort360, backend of the Cohort360 web app @ https://github.com/aphp/Cohort360-FrontEnd and the Administration Portal @ https://github.com/aphp/Cohort360-AdministrationPortal
No description provided.
Confit is a complete and easy-to-use configuration framework aimed at improving the reproducibility of experiments by relying on the Python type annotations, minimal configuration files and a robust CLI.
eds-scikit is a Python library providing tools to process and analyse OMOP data
FHIR MapBuilder is a Visual Studio Code extension designed to facilitate the edition of FHIR StructureMap resources using FHIR Mapping Language (FML).
normes homologuées par AFNOR : NF S97-53x Novembre 2010 Informatique de santé - Messages concernant la transfusion sanguine - Message de traçabilité de produits sanguins labiles.
No description provided.
This is a simple docker image continuously refreshing a krb5 ticket cache. It is intended to be used in K8S as a side-car runing in a pod needing such authentication mechanism.
A research PACS Solution adapted to Big Data Plateform
No description provided.
The AP-HP FormBuilder allows building (creating and editing) forms in FHIR - R4 format (Questionnaire). It is based on the NLM FormBuilder, an open-source project developed by the Lister Hill National Center for Biomedical Communication (LHNCBC).
No description provided.
EDS-TeVa provides a set of tools that aims at modeling the adoption over time and across space of the Electronic Health Records.