Repositories
18Scripts (bash, R) and environment for RNAseq analysis
Lessons material for the EB3I n1 2025 SC
A dirty repo with my custom scripts for any project
Helper package for the analysis of single cell RNAseq data in the Seurat format
No description provided.
Supports de cours de l'Ecole de Bioinformatique Aviesan - IFB - Inserm "Initiation au traitement des données de génomique obtenues par séquençage à haut débit"
A supplementary for singleCellTK, filling some "holes" (empty droplets filtering, cell cycle scoring)
WisecondorX — An evolved WISECONDOR
Just a R data package that contains structural genomic information for widely used genomes
No description provided.
Single cell RNA sequencing analysis course
Perform WES read mapping, grouping, recalibration and quality controls
A SingleCell RNASeq pre-processing pipeline built on snakemake
Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
Conda recipes for the bioconda channel.
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
Easy Copy Number !
SCA code repository