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24Code and files for the main nf-core website.
Repository to host tool-specific module files for the Nextflow DSL2 community!
a cutting-edge cell segmentation model specifically designed for single-molecule resolved spatial omics datasets. It addresses the challenge of accurately segmenting individual cells in complex imaging datasets, leveraging a unique approach based on graph neural networks (GNNs).
Quality Control downstream of alevin-fry / simpleaf
No description provided.
No description provided.
No description provided.
Test data to be used for automated testing with the nf-core pipelines
A single cell transcriptomics pipeline for QC, integration and making the data presentable
No description provided.
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No description provided.
Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
A single-cell RNAseq pipeline for 10X genomics data
CAusal Reasoning for Network Identification with integer VALue programming in R
No description provided.
A rust framework to make using alevin-fry even simpler
Differential expression and allelic analysis, nonparametric statistics
Clone of the Bioconductor repository for the DropletUtils package.
No description provided.
No description provided.
Nextflow training material
No description provided.
Multi-omics factor analysis v2