GitHunt

Oliver Powell

Orpowell

Plant Bioinformatician at KAUST.

Saudi Arabia

Languages

Python75%Ruby13%HTML6%Jupyter Notebook6%

Repos

17

Stars

21

Forks

4

Top Language

Python

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Top Repositories

Repositories

17
OR
Orpowell/alphafold-analyser

A command line tool for rapid visualisation of AlphaFold2 and AlphaFold3 predictions.

Python144Updated 5 months ago
alphafoldalphafold2structural-bioinformaticsstructural-biology
OR
Orpowell/homebrew-tap

No description provided.

Ruby00Updated 5 months ago
OR
Orpowell/HMM-Annotator

A python tool for annotating genomic and transcriptomic sequences using hidden Markov models of protein domains.

Python00Updated 8 months ago
OR
Orpowell/wheat_kfps

Python Scripts for the analysis of kinase fusion proteins in hexaploid wheat.

Python00Updated 7 months ago
OR
Orpowell/tea-tools

No description provided.

Python00Updated 8 months ago
OR
Orpowell/autodock-vina-automator

A script to run docking experiments in AutoDock Vina for several ligands at once with technical replicates.

Python20Updated 3 years ago
autodockautodock-vinaautodock4biochemistrycomputational-biologyligand-recepotor
OR
Orpowell/SABAT

A toolkit for identifying gene homologs in closely related species.

Python10Updated 1 year ago
bioinformaticsgene-annotationgene-prediction
OR
Orpowell/NLR-Assembler

NLR-Assembler is a command line tool for improving RenSeq Assemblies using linked-read sequencing by 10x Genomics.

Python10Updated 2 years ago
bioinformatics-pipelinebioinformatics-toolgenomics-analysisplant-genomics
OR
Orpowell/NLR-Finder

A tool for building a phylogenetic tree of NLRs using the Chinese Spring v2.1 Reference Genome

Python00Updated 1 year ago
OR
Orpowell/conservation_mapper

No description provided.

Python00Updated 1 year ago
OR
Orpowell/SABAT_NF

A NextFlow pipeline for the annotation of gene homologs using SABAT.

Python00Updated 1 year ago
bioinformaticsbioinformatics-pipelinegene-annotation
OR
Orpowell/biotiteFork

A comprehensive library for computational molecular biology

00Updated 2 years ago
OR
Orpowell/TreeMap

A simple tool for plotting the coordinates of trees on a map.

Python00Updated 2 years ago
mapping-toolstrees
OR
Orpowell/training-requirements

BRN training requirements to contribute to projects

HTML00Updated 4 years ago
OR
Orpowell/CRISPR-Designer

A tool for designing sgRNAs and repair templates for CRISPR experiments

Python20Updated 2 years ago
biologycomputational-biologycrispr-cas9molecular-biologywet-lab-protocols
OR
Orpowell/orpowell.github.io

No description provided.

Ruby00Updated 3 years ago
OR
Orpowell/BRCA1-Protein-Analysis

A basic bioinformatic analysis of the BRCA1 protein across species.

Jupyter Notebook10Updated 5 years ago

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