Whole Genome Sequencing analysis, WGS analysis

Call and score variants from WGS/WES of rare disease patients.

Analysis pipelines for genomic sequencing data

Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)

Integrated copy number variation detection toolset

Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models

GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data and absolute copy number profiles. https://shixiangwang.r-universe.dev/gcap

Exome/Capture/RNASeq Pipeline Implementation using snakemake

The snakemake workflow for whole-exome sequencing analysis and generating vcf files

DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions

A pipeline for detecting Somatic Insertion of DE novo RETROcopies

The DKFZ alignment workflow plugin originally developed at the eilslabs

WES Client SDK for Go - 用于链外应用开发的 Go 语言客户端工具包，提供 Token、Staking、Market、Governance、Resource 等业务服务

Work Environment Survey employee engagement states

Pipelines for SNVs and InDels calling (single sample and joint) in WEGS, WGS, and WES using GATK.

No description provided.

Whole exome sequencing snakemake workflow based on GATK best practice

No description provided.

SCHeMa (Scheduler for scientific Containers on clusters of Heterogeneous Machines) is an open source platform to facilitate the execution and reproducibility of computational experiments on heterogeneous clusters.

WES 区块链智能合约开发工具包 - Go 语言版本。提供业务语义优先的合约开发能力，支持 TinyGo WASM 编译，零外部依赖，专为企业级智能合约开发设计。

This is a nextflow pipeline for variant calling of low frequency variants in panel/WES high-throughput data.

WES 区块链智能合约开发工具包 - JavaScript/TypeScript 版本。支持 TypeScript/AssemblyScript 编写合约，提供业务语义优先的 API，专为 WASM 智能合约开发优化。

In this repository I backup the pipelines I write for the project I am involved

Single point and rare variant analysis for the SCALLOP-Seq analysis

Transcriptional variant verification to validate predicted variants from genomic data in expressed transcripts

Enterprise Warehouse Management & Execution System - Comprehensive documentation covering architecture, DDD design patterns, microservices implementation, and deployment strategies for modern WMS/WES platform

Reproduction and analysis of RNA-seq and WES data to study response to anti–PD-1 immunotherapy in melanoma with HPC-based bioinformatics workflows.

Reference pipeline for somatic SNP detection using BWA for mapping, Mutect2 for calling and Annovar for annotation

Whole-genome variant annotation data manipulation using GDS files

WES Client SDK for JavaScript/TypeScript - 用于链外应用开发的 JavaScript/TypeScript 客户端工具包，提供 Token、Staking、Market、Governance、Resource 等业务服务