:pencil2: A versatile DNA sequence optimizer

🎨 Python library to plot multi-part genetic constructs

🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software

:curly_loop: Draw genetic elements with HTML & CSS

Batch domestication of genetic parts with Python

State of the art software for RNA sequence design. The first to solve the Eterna benchmark!

:link: Short overhangs design for DNA assembly

[Adv. Sci. 2025] PRO-LDM: A Conditional Latent Diffusion Model for Protein Sequence Design and Functional Optimization

:scissors: Design compact restriction sites arrays (python utility)

:crystal_ball: Predict DNA assembly clone validity rates - powered by Kappa

Python client for Ginkgo's AI model API

A PyPulseq-based client/server MR sequence design toolbox.

cDWI, cDTI, cardiacDTI, design of DWI sequences (SE, STEAM, TRSE), gradient sampling shells, processing helix angle (HA), sheet angle (E2A, SA), transverse angle (TA)

A Python client for communication between Pulseq interpreter and Pulseq design server.

ProteinMPNN MCP server for protein sequence design (inverse folding)

LigandMPNN MCP server for ligand-aware scaffold-based sequence generation (inverse folding)

Public code for AI-based DNA primer design using auto-encoder, convolutional neural network and Cox regression model.