Hetionet: an integrative network of disease

User-friendly extensions of the DrugBank database

OBO-formatted ontologies → networkx (Python 3)

Hetnets in Python (relocated from dhimmel/hetio)

Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing

Library of Integrated Cellular Signatures L1000

Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov

Processing SIDER 4.1: the side effect resource

Processing the DisGeNET database of disease–gene association

Analysis of the human symptoms–disease network

User-friendly extensions to the Disease Ontology

Processing high-throughput drug indication resources.

Computing term cooccurrence in MEDLINE

User-friendly extensions to MeSH

Process BindingDB

User-friendly Gene Ontology annotations

Source code for https://het.io website

Markdown source for the Project Rephetio Manuscript https://doi.org/10.7554/eLife.26726

Miscellaneous Content for Project Rephetio to repurpose drugs

Machine learning and feature extraction for the Rephetio project

Converting DrugCentral data to Rephetio identifiers

Extract uniprot mappings to other vocabularies

GTEx Expression Analysis

Processing the human Entrez Gene subset

Compiling human protein–protein interactions

Processing the DISEASES database

Extracting disease-gene associations from the GWAS Catalog

A compilation of pathway gene sets

Generating expression signatures for disease using STARGEO

Gene–Tissue relationships from the TISSUES database