A Nextflow pipeline designed to classify, align and assemble nanopore metagenomic reads.

Scripts supporting the manuscript submitted to the Molecular Ecology Resources Special Issue 'Omics for species conservation'

Fast and efficient conversion of Nanopore modBAM from guppy basecaller to BED files for differential methylation and machine learning predictions

A snakemake pipeline to call structure variants from ONT data

Decision-support framework for adaptive early stopping in Oxford Nanopore genome polishing.

Data analysis framework to automatically process, compare and analyze both 2nd generation and 3rd generation sequencing data from Illumina and ONT platforms.