A bioinformatics best-practice analysis pipeline for epitope prediction and annotation

HLA-II ligand predictor.

MHC class II binding prediction

Major Histocompatibility Complex (MHC) Binding Affinity Prediction

Peptide Microarray Workflow. Python, open-source

Structure-informed Prediction of Xenotransplantation Immunogenicity

Spring 2021 - Automation of Scientific Research - course project

Analysis code, data and figures on the omicron MHC binding paper

Code for ImmunoGeNN: Accelerating Early Immunogenicity Assessment for Generative Design of Biologics

A method for predicting promiscuous non-classical HLA binding sites in an antigen

Build a classifier that predicts if a given peptide will be presented by a specific MHC1 protein.

Fall 2020 - Computational Medicine - course project

Repository experimenting with predicting binding affinities inspired by DeepLigand

Protein Representation-integrated Epitope-MHC Class II Binding Prediction