65 results for “topic:lc-ms”
LC-MS data processing tool for large-scale metabolomics experiments.
Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing
Mass spectrometry data visualization
The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
Workflow for LC-MS feature analysis and spatial mapping
BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)
Workflow4Metabolomics meta repository
QC systems for metabolomics studies
A tool for mass spectrometry data analysis.
R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis methods and tools for metabolomics and other omics,
Package for analyzing MS with Python
R/Bioconductor Package - Interface to the Metabolomics Workbench RESTful API
Collaborative workflow for untargeted metabolomics data processing and analysis using open-source tools. https://doi.org/10.3390/metabo13040463
Sipros 4 for stable isotopic mass spectrum metaproteomics proteomics
Tutorials and workshops describing LC-MS(/MS) data pre-processing and analysis using the xcms Bioconductor package
LipidHunter is capable to perform bottom up identification of lipids from LC-MS/MS and shotgun lipidomics data by resembling a workflow of manual spectra annotation. LipidHunter generates interactive HTML output with its unique six-panel-image, which provides an easy way to review, store, and share the identification results.
Deep Denoising Autoencoder-assisted Continuous Scoring of Peak Quality in High-Resolution LC−MS Data
A mass spectrometry package for Julia
📊 User-friendly mass spectrometry and chromatography data analysis app with native UI, graphing, quantification, MS/MS and data export capabilities
PepFoot: a user friendly GUI for protein footprinting analysis
Applying Deep Learning Methods to LC-MS Metabolomics Data to Improve Metabolite Identification
The Multi-assay Mass Spectrometry Integration Project
An app for visualizing LC-MS features detected with Optimus workflow
A toolkit for processing targeted small molecule mass spectrometry data
R/Bioconductor package - STRUCT: STatistics in R Using Class Templates
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R Package for Isotopic Mass Spectra Analysis in Proteomic and Metabolomic Stable Isotope Probing