WildlifeDatasets: An open-source toolkit for animal re-identification

Automatically identify animals in camera trap images by training a deep neural network.

Plant phenology models in python with a scikit-learn inspired API

A Python Package for Adaptive Spatio-Temporal Exploratory Model (AdaSTEM)

Digital organisms ecology system experiment

A toolbox for C++ devs wanting to build geospatial population genetics simulators !

A visualizer of companion plants relationships made with Python and SQLite

Program for running simulations on Odum graphs

Package for fitting and testing alternative models for single cohort litter decomposition data

Implementation of a decision tree ensemble which splits each node using learned linear and non-linear functions.

Are conservation and ecological decision support tools reproducible?

Official Github Repository for Neo-Cybernetics, a discipline that introduces a holistic paradigm for understanding the driving forces and flows of systems, be they natural, technological or sociocultural.

Artificial Superintelligence for the (Good!) Quasieternity for (Good!) Happiness for the (Somewhat Unrestricted, local & global & more!) Biosphere (of unrestricted Any and maybe more).

We are the Department of Ecological Dynamics of the Leibniz IZW! This repository stores the distill webpage of the department.

Simulation model of the biomass of grassland plant species

A Quarto preregistration template for preregistering ecological modelling studies

Artificial Superintelligence Knots (I coined or re-invented this).

Agent-based metabolic modelling of microbial communities in time and continuous µ-meter-scale space

Bayesian Priors for Matrix Population Models

Course website for BIOSCI 1120: Biostatistics at the University of Pittsburgh Department of Biological Sciences

Codes used for spatial analysis incorporating WORLDCLIM open source climate data variables

Explainable Species Distribution Modeling

A package written for my PhD thesis research. The one can perform reconstruction of the climatic niche of a species using this. Documentation not finished yet.

The software associated with Ecological graph theory: simulating competition and coexistence on graphs

This repository provides the code and data to model fire and drought effects in the Mediterranean forests, as in the paper Baudena et al 2020, New Phytologist

Evolution of the major histocompatibility complex genes repertoire and number of copies in an agent-based modelling approach

Physical processes in ecosystems: Educational modules introducing biophysical ecology and use of the TrEnChR package.

No description provided.

An R {targets} pipeline for cleaning up and analyzing satellite telemetry data of GPS-collared Roosevelt elk on Vancouver Island, BC.

Case study in replicating decisions in ecology and conservation