Fast lossless data compression in Go

SeqAn's official repository.

Compression Benchmark

The libsais library provides fast linear-time construction of suffix array (SA), generalized suffix array (GSA), longest common prefix (LCP) array, permuted LCP (PLCP) array, Burrows-Wheeler transform (BWT) and inverse BWT based on the induced sorting algorithm with optional OpenMP support for multi-core parallel construction.

Fast lossless data compression in C++

BWT construction and search

Fast lossless data compression in Java

No description provided.

Custom HA integration for BWT Perla devices

Fast and portable delta encoding for .NET in 100% safe, managed code.

libcubwt is a library for GPU accelerated suffix array and burrows wheeler transform construction.

Accurate, resource-frugal and deterministic DNA sequence classifier.

Zip-Ada: a standalone, portable pure Ada library for .zip archives. Includes LZMA and BZip2 byte stream encoder & decoder pairs.

msufsort parallel suffix array construction algorithm

Experimental parallel compression algorithm

gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]

Code for the paper Succinct k-mer Set Representations Using Subset Rank Queries on the Spectral Burrows-Wheeler Transform (SBWT)

Electrum plugin for Bitcoin Wallet Tracker, a lightweight personal indexer for bitcoin wallets. Allows connecting Electrum to a Bitcoin Core full node backend.

Burrows-Wheeler Transform and FM-index in golang

Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]

novel high throughput entropy encoder for BWT data

String algorithm visualizations

place for building up a msbwt resource in Rust

fast classification of metagenomic sequences with lightweight de Bruijin graph-based reference indexing

This implements the Burrows Wheeler Transform using c++ templates.

C++17 implementation of online RLBWT construction in optimal-time and BWT-runs bounded space

Determine the state of a BWT AQA Life S decalcifier using an ESP32 + TCS34725 color sensor and integrate into Home-Assistant using ESPHome

Space-efficient variable-order Markov models

TeraTools: Terabase scale pangenome analysis tools

Fast, GPU-based decompressor for bzip2 streams.