CodonTransformer (1M+ Downloads); The tool for codon optimization, optimizing DNA for protein expression

Precision genomics for everyone, everywhere. Powered by private AI.

Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.

Stable-Pi-Core is a next-generation decentralized ecosystem that integrates blockchain, quantum AI, IoT, edge computing, and AR/VR to deliver secure, scalable, and personalized solutions for payments, governance, and real-world applications—redefining the future of technology with unmatched flexibility and innovation.

The software behind Chai's open-source Real-Time PCR instrument

Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing

Claude-Code for Bioinformatics

A free and collaborative space for Machine Learning 🤖 applied to Biology 🧬

A Quantum Computing and Machine Learning Model that accelerates the Drug Research and Development process

TISIGNER: Unleash the power of synthetic biology

Binomica Public Repository for Biological Parts

This repo is dedicated to make bioinformatics resources available for anyone who wish to enter this field. (You may find it useful or not useful based on your level). I am still embarking my path in the field, just posting things based on my knowledge and the things which worked for me personally, they may/may not work with you, totally fine.

Explore biomolecular pathways in Reactome from the command-line or a Python script

The ecobio-redemiatech-core repository serves as the foundational codebase for the EcoBio Redemiatech initiative. It includes essential algorithms, genetic engineering protocols, and synthetic biology tools designed for the development and optimization of genetically engineered microorganisms aimed at environmental remediation.

This pipeline provides a way to perform pharmaceutical compounds virtual screening using similarity-based analysis, ligand-based and structure-based techniques. The pipeline contains a collections of modules to perform a variety of analysis.

High-Performance Automatic Differentiation for Python

This project is done for the Biomedicine, Biotechnology and Public Healthcare department of the University of Cádiz. They idea is to automatize the processing of the microscopic images of their experiments related to angiogenesis.

Resources for learning Biotechnology, Biology, Synthetic Biology, Genomic and Bioinformatic

a web app that can classify how likely specific mutations in DNA are to cause diseases (variant effect prediction). We will deploy and use the state-of-the-art Evo2 large language model, and use it to predict the pathogenicity of single nucleotide variants (SNVs)

genomics, biochemistry, biotechnology, cell biology, biophysics, ecology

Icahn Graduate School of Medicine: Systems Biology & Biotechnology Specialization

Wetlab Calculator

The egaia-core repository serves as the foundational framework for Project EGaia, encompassing essential algorithms, data models, and tools for ecological restoration initiatives.

Practical biomagnet stimulators for science, development and entertainment! Open source!

A Python molecular biology CAD tool with a dead-simple user interface

FLYCOP (FLexible sYnthetic Consortium OPtimization)

Open-source mechanistic model for ion exchange chromatography

ZINC is an indie project supported by the community. Thank you!

I developed Machine Learning Software with multiple models that predict and classify AID362 biology lab data. Accuracy values are 99% and above, and F1, Recall and Precision scores are average (average of 3) 78.33%. The purpose of this study is to prove that we can establish an artificial intelligence (machine learning) system in health. With my regression model, you can predict whether it is Inactive or Inactive (Neural Network or Extra Trees). In classification (Neural Network or Extra Trees), you can easily classify the provided data whether it is Inactive or Active.

Deep Learning Template for bacterial image classification in Keras.