Algorithms from circuit theory to predict connectivity in heterogeneous landscapes

An R package for visualizing movement data (e.g. from GPS tracking) and synchronous environmental data (e.g. from remote sensing) as video animations.

A Low-cost Open-source High-speed Multi-camera Motion Capture System.

Functions to compute omnidirectional landscape connectivity using circuit theory and the Omniscape algorithm.

Maximum likelihood analysis Of animal MovemENT behavior Using multivariate Hidden Markov Models

fit latent variable movement models to animal tracking data

R package - Animal movement modelling using hidden Markov models

A Python Package for Adaptive Spatio-Temporal Exploratory Model (AdaSTEM)

🛰🐦 Bird tracking - GPS tracking network for large birds

A workflow and shiny app for exploring biologging data

Individual-based simulation of multistate movements in rivers, heterogeneous and homogeneous spaces incorporating local landscape bias in R

Script for Barrier Behavior Analysis (BaBA). This analysis is to detect and quantify animal movement behavior upon encountering with linear barriers (e.g. roads, fences, pipelines, rivers). Reference article: doi/10.1111/1365-2664.13806

FreeClimber is a background-subtracting particle detection platform designed to quantify group climbing performance in a Drosophila negative geotaxis (climbing) assay

An application designed to help researchers and managers plan animal tracking projects tailored to their specific research questions.

R package to access data from the European Tracking Network

Source code for an entry to the BES mapping animal movements contest.

🐦 Tools to import, clean, and visualize animal movement data in R

An R toolbox for analysing movement across space and time

R functions to dead-reckon reckon animal movement from raw motion sensor data

Acoustic telemetry data 🔊🐟

R package for basic data processing for spatial animal tracking data

The abmAnimalMovement simulates animal movement use a discrete time agent-based model, programmed in C++ via the Rcpp package. The simulations include a number of key internal and external movement influences, as well as parameters for navigation and mobility capacity of the animal.

An agent-based model (with a web simulation) for Guizhou "golden" monkey population and movements using the Mesa Python framework; thesis project + human/GTGP expansion; Summer 2018-Winter 2019

Tools for pre-processing high-throughput animal tracking data.

Visual Abstraction of Spatio-Temporal Networks in Collective Animal Behavior (EuroVis2020)

🐢 personal site

slides, data, code and a book in support of workshops at AFSC and SWFSC for the R package `crawl`

R package to serve data from the European Tracking Network over a restful api

R package for Statistical Modeling of Animal Movements

Individual-based model to simulate the evolution of movement strategies under risk of pathogen spread.