Multi-platform, free open source software for visualization and image computing.

A set of common support code for medical imaging, surgical navigation, and related purposes.

:warning: OBSOLETE | Multi-platform, free open source software for visualization and image computing.

dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results

A Slicer extension that enables user to interact with a Slicer scene using virtual reality.

A Slicer extension to provide a GUI around pyradiomics

A 3D printing STL-to-GCode slicer based on the Clipper library.

Website for NA-MIC Project Weeks

Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.

Slicer extensions index

Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python

Build, package, test, and run 3D Slicer and Slicer Extensions in Docker.

3D Slicer extension for Segment Anything Model (SAM) developed by Meta

An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. This software called Slicer Shape AnaLysis Toolbox (SlicerSALT), will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.

Template to be used as a starting point for creating a custom 3D Slicer application

An open-source CMake-based project that provides macros and associated tools for the easy building of 3D Slicer command line interface (CLI) modules.

Bring the capabilities of 3D Slicer to the web with modern UI using the trame framework!

SourceCode of serial tutorials on 3D Slicer extension development for beginners

3D Slicer Module for connecting to model repository and use models for image analysis.

Ultrasound image formation, processing, and analysis. Interfaces built off the ITKUltrasound library.

Batch reformatting of 3D Slicer radiomics CSV files into sample-by-feature tables for machine learning.

PySERA – Open-Source Standardized Python Library for Automated, Scalable, and Reproducible Handcrafted and Deep Radiomics

An extension to 3D Slicer to support quantitative imaging and image-guided interventions research in prostate cancer.

3D Slicer extension containing tools for importing DICOM PET series

3D Slicer module that creates a gradient map representing the bone thickness of a volume using VTK ray-casting.

3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).

Simple Scripted Module to batch process patients in 3D Slicer

3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab

3D Slicer Extension for PETTumorSegmentation

General-purpose features that may be integrated into VTK library in the future.