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Fast and scalable fitting of over-determined generalized-linear models (GLMs)

batchglm was developed in the context of diffxpy to allow fast model fitting for differential expression analysis for single-cell RNA-seq data. However, one can use batchglm or its concepts in other scenarios where over-determined GLMs are encountered.

pip install -r requirements.txt

To run unit tests:

pip install -e .
python -m unittest

Languages

Python98.4%Makefile1.5%Dockerfile0.1%

Contributors

BSD 3-Clause "New" or "Revised" License
Created July 2, 2018
Updated June 19, 2025