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sghignone/TransDecoder

TransDecoder identifies candidate coding regions within transcript sequences.

TransDecoder v.5.5.0

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The current build is based on the bioconda distribution of Brian Haas' transdecoder 5.5.0.

TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.

Visit the project wiki for all TransDecoder documentation.

Contributors

GNU General Public License v3.0
Created February 5, 2021
Updated February 10, 2026
sghignone/TransDecoder | GitHunt