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ecisneros8/pynucastro

a python library for nuclear astrophysics

pynucastro

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pynucastro is a python library for interactively creating and
exploring nuclear reaction networks. It provides interfaces to
nuclear reaction rate databases, including the JINA Reaclib nuclear
reactions database.

The main features are:

  • Ability to create a reaction network based on a collection of rates, a set of nuclei,
    or an arbitrary filter applied to a library.

  • Interactive exploration of rates and networks in Jupyter notebooks.

  • Many different ways of visualizing a network.

  • An NSE solver to find the equilibrium abundance of a set of nuclei given a
    thermodynamic state.

  • Ability to write out python or C++ code needed to integrate the network.

  • Support for tabular weak rates.

  • Rate approximations and the derivation of reverse rates via detailed balance.

  • Easy access to nuclear properties, including T-dependent partition
    functions, spins, masses, etc.

Documentation

Documentation for pynucastro is available here:

https://pynucastro.github.io/pynucastro/

Examples

The following example reads in the ReacLib rate database and
gets the rate for C13(p,g)N14 and evaluates it at a
temperature of 1.e9 K and makes a plot of the T dependence:

In [1]: import pynucastro as pyna

In [2]: rl = pyna.ReacLibLibrary()

In [3]: c13pg = rl.get_rate_by_name("c13(p,g)n14")

In [4]: c13pg.eval(1.e9)
Out[4]: 3883.4778216250666

In [5]: fig = c13pg.plot()

In [6]: fig.savefig("c13pg.png")

The resulting figure is:

An extensive demonstration of the capabilities of pynucastro is shown in this notebook:

Binder

pynucastro-examples.ipynb

We can also interactively explore a reaction network. Here's an example of hot-CNO with breakout reactions:

Binder

by increasing the temperature, you can see the transition from CNO to
hot-CNO (proton captures on C13 become faster than the beta decay) and
then the breakout of hot-CNO when the alpha capture on O14 becomes
faster than its decay.

Installation

pynucastro is available on PyPI and can be installed via:

pip install pynucastro

Alternately, to install via source, you can do:

pip install .

for a systemwide install, or

pip install --user .

for a single-user install. This will put the pynucastro modules and library in
the default location python searches for packages.

Requirements

pynucastro is supported on Python 3.10 or later and the following libraries:

  • numpy

  • sympy

  • scipy

  • matplotlib

  • networkx

  • ipywidgets

  • numba

To build the documentation or run the unit tests, sphinx and
pytest are additionally required along with some supporting
packages. See the included requirements.txt file for a list of these
packages and versions. To install the packages from the requirements
file, do:

pip install -r requirements.txt

Is important to stress out that all the dependencies should be
installed before pynucastro, otherwise the installation should be
repeated.

Contributing

We welcome contributions from anyone, including posting issues or
submitting pull requests to the pynucastro github. For more details
on how to contribute to pynucastro, please see CONTRIBUTING.md.

Core Developers

People who make a number of substantive contributions (new features,
bug fixes, etc.) will be named "core developers" of pynucastro.

Core developers will be recognized in the following ways:

  • invited to the group's slack team

  • listed in the User's Guide and website as a core developer

  • listed in the author list on the Zenodo DOI for the project
    (as given in the .zenodo.json file)

  • invited to co-author general code papers / proceedings describing
    pynucastro. (Note: science papers that use pynucastro will always
    be left to the science paper lead author to determine authorship).

If a core developer is inactive for 3 years, we may reassess their
status as a core developer.

Getting Help

We use our Github Discussions page for requesting help and
interacting with the community.

Languages

Python60.4%C++23.0%Jupyter Notebook15.0%TeX1.0%Makefile0.3%Fortran0.3%Shell0.0%C0.0%
BSD 3-Clause "New" or "Revised" License
Created April 22, 2025
Updated April 22, 2025
ecisneros8/pynucastro | GitHunt