Mouse-MRI-Head-Scan-Image-Preprocessing

Case 1: Structural Scan Protocol: Raw -> Nifti -> Auto Orient Align -> N4 Bias -> Within-sub Regis -> DNN_Skull-Stripping
Case 2: CBV Scan Protocol: Raw -> Nifti -> Auto Orient Align -> Within-sub Regis -> Derive CBV in native space -> DNN_Skull-Stripping